See [build environment setup](https://docs.qmk.fm/build_environment_setup.html) then the [make instructions](https://docs.qmk.fm/make_instructions.html) for more information.
Note that this is a complete replacement for the firmware, so you won't be
using Bootmapper Client to change any keyboard settings, since not all the
If you prefer (or are having issues with a `program` flash), you can just build it (`make jj40:<keymap-name>` and flash the firmware (`.hex` file) directly with
Windows sometimes doesn't recognize the jj40. The easiest way of flashing a new layout is probably using [HIDBootFlash](http://vusb.wikidot.com/project:hidbootflash).
1. Go to Windows Device Manager and find the keyboard (plug it in while holding down `Backspace` (`Top Right Key`)). It can be found under Human Interface Devices or under Keyboards.
2. Go to properties and the Details tab to find the hardware ID. You want the VID and the PID (code after the underscore). Plug them into HIDBootFlash and hit Find Device.
3. Use `make jj40:<keymap-name>` to generate the .hex file in the qmk basis folder. Select the .hex file in HIDBootFlash and press Flash Device.